The detailed information of tRNA gene sequence


Sequence ID>A171000055
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 1201288
End posion on genome 1201362
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
agtatcaacg
tRNA gene sequence 
GGGCTCGTAGCTCAGTTAGGTAGAGCGCCTGGCTTTTAACCAGGCTGCCTGGGGTTCAAA
TCCCCACGAGCCCGCtc
Downstream region at tRNA end position 
accctattat
Secondary structure (Cloverleaf model)
>A171000055	Lys	TTT
                   g      GCtc accctattat
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     A C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       T G G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     CTGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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