The detailed information of tRNA gene sequence


Sequence ID>A171000059
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 1772221
End posion on genome 1772292
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atttttatta
tRNA gene sequence 
GGGCACGTAGATCAGGGGTAGATCGCTTCCTTGGCATGGAAGAGGCCTCGGGTTCAATTC
CCGACGTGTCCAttt
Downstream region at tRNA end position 
ttccaataat
Secondary structure (Cloverleaf model)
>A171000059	Ala	GGC
                   a      Attt ttccaataat
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     A G C C C     A
        G A        A      | | | | |     A
      G     C T A G       T C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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