The detailed information of tRNA gene sequence


Sequence ID>A171000062
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 2053530
End posion on genome 2053605
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaggtaaa
tRNA gene sequence 
GGGGGTGTAGCTTAGCCAGGTCAGAGCGTCCGGCTCATAACCGGAAGGCCATGGGTTCGA
ATCCCTTTACCCCCACtt
Downstream region at tRNA end position 
aaaaacacga
Secondary structure (Cloverleaf model)
>A171000062	Met	CAT
                   a      ACtt aaaaacacga
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T          T A
                    T     T T C C C     A
    C C G A        A      |   | | |     G
  A         T T C G       A T G G G     C
  G         + | | |                 T T
  G         G A G C
    T C A          G     AGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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