The detailed information of tRNA gene sequence


Sequence ID>A171000066
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 2388737
End posion on genome 2388821
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttccgcggat
tRNA gene sequence 
GCCGAGGTACTCTAACGGTAAGGGACTGGTCTCGAAAACCAGCGGTCGCAAGGCCTTAGG
AGTTCAAGTCTCCTCCTCGGCGCCA
Downstream region at tRNA end position 
tttcgcattt
Secondary structure (Cloverleaf model)
>A171000066	Ser	CGA
                   t      GCCA tttcgcattt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     T C C T C     A
        A A        A      | | | | |     A
      C     T C T C       A G G A G     C
      G     | | + |                 T T
      G     A G G G
        T A        A     CGGTCGCAAGGCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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