The detailed information of tRNA gene sequence


Sequence ID>A171000067
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 2460049
End posion on genome 2460133
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttttttgat
tRNA gene sequence 
GTCGCGGTATCCAAGCCTGGTATGGAGCAGGTTTGCTAAACCTGTGCTCTTCGGAGCTCC
GGAGTTCAAATCTCCGCCGCGGCGCtt
Downstream region at tRNA end position 
ctatttatct
Secondary structure (Cloverleaf model)
>A171000067	Ser	GCT
                   t      GCtt ctatttatct
                     G - C
                     T + G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G C C T C     A
      C G A        A      | | | | |     A
    C       A C C T       C G G A G     C
    T       | | | |                 T T
    G       T G G A
      G T A        G     TGCTCTTCGGAGCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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