The detailed information of tRNA gene sequence


Sequence ID>A171000079
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 1403854
End posion on genome 1403780
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttttcaagat
tRNA gene sequence 
GCCTCTGTGGCTCAGCCTGGTAGAGCGGCTGACTTGTAATCAGCAGGTCGCGAGTTCAAA
TCTCGCCGGGGGCTCtt
Downstream region at tRNA end position 
ttccttttta
Secondary structure (Cloverleaf model)
>A171000079	Thr	TGT
                   t      TCtt ttccttttta
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     T + G
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     A
    C       C T C G       G C G A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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