The detailed information of tRNA gene sequence


Sequence ID>A171000085
Genome IDAP011952
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermobacter sp. CaT2 [AP011952]
Start position on genome 559074
End posion on genome 559158
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
attttcccat
tRNA gene sequence 
GCAGGGGTGGTCGAGCGGTCAAAGGCGCTAGGTTGAGGGCCTAGTGGGGGAGTCCCTTCG
CGGGTTCGAATCCCGTCCCCTGCACtt
Downstream region at tRNA end position 
ctatttcatc
Secondary structure (Cloverleaf model)
>A171000085	Leu	GAG
                   t      ACtt ctatttcatc
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       G C T G       G C G G G     C
    G         | + |                 T T
    T       A G G C
      C A A        G     TGGGGGAGTCCCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.-

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