The detailed information of tRNA gene sequence


Sequence ID>A171000104
Genome IDAP011952
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermobacter sp. CaT2 [AP011952]
Start position on genome 1278560
End posion on genome 1278632
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggcttcagag
tRNA gene sequence 
GGGCCGGTGGTCTAGGGGTATGATACCTCGCTCACACCGAGGTGGTCACGAGTTCGAATC
TCGTCCGGCCCACtg
Downstream region at tRNA end position 
gattttcatt
Secondary structure (Cloverleaf model)
>A171000104	Val	CAC
                   g      ACtg gattttcatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C T C     A
        G A        G      | | | | |     G
      G     T C T G       A C G A G     C
      G       | | +                 T T
      G     T G A T
        T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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