The detailed information of tRNA gene sequence


Sequence ID>A171000117
Genome IDAP011952
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermobacter sp. CaT2 [AP011952]
Start position on genome 1142964
End posion on genome 1142889
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position
tgattcaatt
tRNA gene sequence
GCCGGGGTGGGGTAGGCGGTTATCCTTCGGGACTGTGGATCCCGCGACTCGGGTTCAAAT
CTCGGCCCCGGCCCCA
Downstream region at tRNA end position
ttctcatcac
Secondary structure (Cloverleaf model)
>A171000117	His	GTG
                   t      CCCA ttctcatcac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C T C     A
      G G A        G      + | | + |     A
    C       T G G G       T C G G G     C
    G         | | +                 T T
    G       T C C T
      T T A        T     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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