The detailed information of tRNA gene sequence


Sequence ID>A171000161
Genome IDCP000852
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [CP000852]
Start position on genome 1429777
End posion on genome 1429865
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagcatttag
tRNA gene sequence 
GCCGGGGTGGCCGAGCCTGGTCCAAGGCGTGGGCCTTGAGAGCCCATCCCCGCAAGGGGG
CCCGGGTTCAAATCCCGGCCCCGGCGCCA
Downstream region at tRNA end position 
gggtttcatt
Secondary structure (Cloverleaf model)
>A171000161	Ser	TGA
                   g      GCCA gggtttcatt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  T         G C C G       C C G G G     C
  G           | | |                 T T
  G         A G G C
    T C C A        G     TCCCCGCAAGGGGGC
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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