The detailed information of tRNA gene sequence


Sequence ID>A171000188
Genome IDCP000855
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus onnurineus NA1 [CP000855]
Start position on genome 158981
End posion on genome 159056
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ccaccatcgt
tRNA gene sequence 
GGGCCCGTGGCCTAGGGGATATGGCGCCGGCCTTCGGAGCCGGTAGTCGCGGGTTCAAAT
CCCGCCGGGCCCGCCA
Downstream region at tRNA end position 
tagcaaccct
Secondary structure (Cloverleaf model)
>A171000188	Arg	TCG
                   t      GCCA tagcaaccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      G G A        G      | | | | |     A
    G       T C C G       G C G G G     C
    G         | | |                 T T
    A       T G G C
      T A          G     TAGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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