The detailed information of tRNA gene sequence


Sequence ID>A171000226
Genome IDCP000855
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus onnurineus NA1 [CP000855]
Start position on genome 92743
End posion on genome 92666
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agcgggcagt
tRNA gene sequence 
GGACCGGTAGCCTAGCTAGGATAGGGCGGCGGCCTCCTAAGCCGCAGGTCCGGGGTTCAA
ATCCCCGCCGGTCCGCCA
Downstream region at tRNA end position 
gcacactaaa
Secondary structure (Cloverleaf model)
>A171000226	Arg	CCT
                   t      GCCA gcacactaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
    T C G A        A      | | | | |     A
  A         T C C G       C G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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