The detailed information of tRNA gene sequence


Sequence ID>A171000227
Genome IDCP000866
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus maritimus SCM1 [CP000866]
Start position on genome 88220
End posion on genome 88306
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aatttccatT
tRNA gene sequence 
GCGGGAGTCGCCCAGCCTGGTCAACGGCGTAAGGTTCAGATCCTTATCTTCTAGGAGTTC
GTGGGTTCAAATCCCACTTCCCGCATac
Downstream region at tRNA end position 
taattatttt
Secondary structure (Cloverleaf model)
>A171000227	Leu	CAG
                   T      ATac taattatttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T          T A
                    T     C A C C C     A
    C C G A        C      | | | | |     A
  T         C C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TCTTCTAGGAGTTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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