The detailed information of tRNA gene sequence


Sequence ID>A171000259
Genome IDCP000867
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus maripaludis [CP000867]
Start position on genome 860656
End posion on genome 860729
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cttaatgaat
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGCCGTGGGTTCAAAT
CCCGCCGGGTCCACtt
Downstream region at tRNA end position 
tattagcagt
Secondary structure (Cloverleaf model)
>A171000259	Ala	TGC
                   t      ACtt tattagcagt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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