The detailed information of tRNA gene sequence


Sequence ID>A171000303
Genome IDCP000968
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Korarchaeum cryptofilum OPF8 [CP000968]
Start position on genome 1471112
End posion on genome 1471199
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcaagtgatt
tRNA gene sequence 
GCCGGGGTGGCCGAGATCGGACCAAGGTGCCCGCCTTGAGAGCGGGTGGCCCTCCGGGCC
GCGAGGGTTCAAATCCCTCCCCCGGCGCtc
Downstream region at tRNA end position 
acctcattta
Secondary structure (Cloverleaf model)
>A171000303	Ser	TGA
                   t      GCtc acctcattta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T A G A        G      | | | | |     A
  C         G C C G       G A G G G     C
  G           | | +                 T T
  G         A G G T
    A C C A        G     TGGCCCTCCGGGCCGC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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