The detailed information of tRNA gene sequence


Sequence ID>A171000317
Genome IDCP000968
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Korarchaeum cryptofilum OPF8 [CP000968]
Start position on genome 1340925
End posion on genome 1340852
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cagtgaggag
tRNA gene sequence 
GGGCCCGTAGCTCAGGCGGTAGAGCGCCGGCTTTGCAAGCCGGAGGCCGCGGGTTCGAGT
CCCGCCGGGTCCACtc
Downstream region at tRNA end position 
aaaagttagt
Secondary structure (Cloverleaf model)
>A171000317	Ala	TGC
                   g      ACtc aaaagttagt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G C C C     A
      G G A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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