The detailed information of tRNA gene sequence


Sequence ID>A171000337
Genome IDCP001014
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum neutrophilum V24Sta [CP001014]
Start position on genome 1636533
End posion on genome 1636609
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttagtaccgg
tRNA gene sequence 
AGCGGGGTAGGCCAGCCTGGTAGGCCGCGGGGCTCATAACCCCGAGGTCCCCGGTTCAAA
TCCGGGCCCCGCTACCA
Downstream region at tRNA end position 
cgccggtttc
Secondary structure (Cloverleaf model)
>A171000337	Met	CAT
                   g      ACCA cgccggtttc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    C       C C G G       C C C G G     C
    T       | | | |                 T T
    G       G G C C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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