The detailed information of tRNA gene sequence


Sequence ID>A171000373
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 158658
End posion on genome 158731
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
taccaatacT
tRNA gene sequence 
GCGATAGTAGTCTAGTGGTAGGACAGGAGCTTCCCAAGCTTCTAACTCGGGTTCGAATCC
CGGCTATCGCATCg
Downstream region at tRNA end position 
attttatgag
Secondary structure (Cloverleaf model)
>A171000373	Gly	CCC
                   T      ATCg attttatgag
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C          T A
                    T     G G C C C     A
        G A        A      + | | | |     G
      T     T C T G       T C G G G     C
      G     + | | |                 T T
      G     G G A C
        T A        A     TAAC
                    G - C
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.-

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