The detailed information of tRNA gene sequence


Sequence ID>A171000374
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 326052
End posion on genome 326125
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tactgcaggT
tRNA gene sequence 
GGATCCATAGGGTAGTGGATATCCTCTTGGGCTTCGAACCCAAGGACCCGGGTTCGAATC
CCGGTGGGTCCGTga
Downstream region at tRNA end position 
taccgaatgc
Secondary structure (Cloverleaf model)
>A171000374	Arg	TCG
                   T      GTga taccgaatgc
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     C - G
                     A - T          T A
                    T     G G C C C     A
      T G A        A      | | | | |     G
    G       T G G G       C C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          C     GGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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