The detailed information of tRNA gene sequence


Sequence ID>A171000375
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 363039
End posion on genome 363111
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ggctcattat
tRNA gene sequence 
GCCAGGGTAGGGTAGTTGGTCATCCTAGGGGACTGTGGATCCCCCGACCCGGGTTCAAAT
CTCGGCCCTGGCCttt
Downstream region at tRNA end position 
tcttttcatc
Secondary structure (Cloverleaf model)
>A171000375	His	GTG
                   t      Cttt tcttttcatc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     G G C T C     A
      T G A        A      | | | + |     A
    T       T G G G       C C G G G     C
    G         | | +                 T T
    G       T C C T
      T C A        A     CGAC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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