The detailed information of tRNA gene sequence


Sequence ID>A171000379
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 690971
End posion on genome 691045
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aattatcacg
tRNA gene sequence 
GGGCTTGTGGCTTAGCCAGGACATAGCGCCGGGCTTCTAACCCGGATGTCGGGGGTTCGA
ATCCCTCCAGGCCCGtct
Downstream region at tRNA end position 
tctttcttgt
Secondary structure (Cloverleaf model)
>A171000379	Arg	TCT
                   g      Gtct tctttcttgt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  A         T T C G       G G G G G     C
  G           | | |                 T T
  G         T A G C
    A C A          G     ATGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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