The detailed information of tRNA gene sequence


Sequence ID>A171000386
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 1212862
End posion on genome 1212935
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttaaagcaga
tRNA gene sequence 
GGGCTCATAGCTCAGTTGGAAGAGCGCCACCCTTGTGGGGTGGAGGCCATAGGTTCAAAT
CCTATTGAGTCCACtt
Downstream region at tRNA end position 
tcgatgcacc
Secondary structure (Cloverleaf model)
>A171000386	Thr	TGT
                   a      ACtt tcgatgcacc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     T A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       G
                  T       G
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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