The detailed information of tRNA gene sequence


Sequence ID>A171000392
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 2413065
End posion on genome 2413147
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aagtacagac
tRNA gene sequence 
GCGGGGATAACCAAGAGGCCAAAGGTGGGCGCCTCAAGAGCGTCTCTCGCAGGAGTTCAA
GGGTTCGAATCCCTTTCCCCGCAtct
Downstream region at tRNA end position 
gcgatcacac
Secondary structure (Cloverleaf model)
>A171000392	Leu	CAA
                   c      Atct gcgatcacac
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T T C C C     A
      A G A        A      | | | | |     G
    G       A C C A       A A G G G     C
    G         | | |                 T T
    C       A G G T
      C A A        G     TCTCGCAGGAGTTC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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