The detailed information of tRNA gene sequence


Sequence ID>A171000395
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 2713877
End posion on genome 2713952
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttatcctt
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTCAGAGCGCCCGGCTCATAACCGGGCGGTCATGCGTTCGA
ATCGCATCGGGCCCACta
Downstream region at tRNA end position 
ctctgccaat
Secondary structure (Cloverleaf model)
>A171000395	Met	CAT
                   t      ACta ctctgccaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
    C T G A        A      | | | | |     G
  C         T T C G       A T G C G     C
  G         + | | |                 T T
  G         G A G C
    T C A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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