The detailed information of tRNA gene sequence


Sequence ID>A171000399
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 2889400
End posion on genome 2889476
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggtaacagtT
tRNA gene sequence 
GGGCCCGTAGCATAGCCAGGTGGTGCGCCCGGCTGATAACCGGGAGGTCATGTGTTCGAA
TCACATCGGGCCCATCt
Downstream region at tRNA end position 
cttattctct
Secondary structure (Cloverleaf model)
>A171000399	Ile	GAT
                   T      ATCt cttattctct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C A C     A
      C G A        A      | | | | |     G
    C       T A C G       A T G T G     C
    A       + | | |                 T T
    G       G T G C
      G T G        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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