The detailed information of tRNA gene sequence


Sequence ID>A171000400
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 2672820
End posion on genome 2672746
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aatacccaca
tRNA gene sequence 
GGGCGTGTGGCCTAGTCTGGATAGGGCGTTAGCCTCCTAAGTTAATGGTCGGGGGTTCAA
ATCCCTCCACGCCCGttc
Downstream region at tRNA end position 
atttttttgc
Secondary structure (Cloverleaf model)
>A171000400	Arg	CCT
                   a      Gttc atttttttgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     A
  T         T C C G       G G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     TGGTC
                    T - A
                    T - A
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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