The detailed information of tRNA gene sequence


Sequence ID>A171000422
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 172489
End posion on genome 172415
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gtcaactggt
tRNA gene sequence 
GGGCTTGTAGCTTAGTTCGGTAGAGCGACGGACTCTTAATCCGTAGGCCAAGGGTTCAAA
TCCCTTCAGGCCCGCta
Downstream region at tRNA end position 
tcatttgatt
Secondary structure (Cloverleaf model)
>A171000422	Lys	CTT
                   t      GCta tcatttgatt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       T T C G       A A G G G     C
    C       + | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.-

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