The detailed information of tRNA gene sequence


Sequence ID>A171000436
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 1580597
End posion on genome 1580671
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gcccgcctgc
tRNA gene sequence 
GCCAGGGGAGCATGGGCGGTTCATGCACTCGACTTGTAATCGAGACTTCCGGGGTTCAAA
TCCCTGCCCTGGCTCtt
Downstream region at tRNA end position 
ctgacggaac
Secondary structure (Cloverleaf model)
>A171000436	Thr	TGT
                   c      TCtt ctgacggaac
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    G     G T C C C     A
      G G G        A      | + | | |     A
    C       T A C G       C G G G G     C
    G       | | | |                 T T
    G       A T G C
      T T C        A     ACTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK