The detailed information of tRNA gene sequence


Sequence ID>A171000446
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 2504675
End posion on genome 2504748
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gaaactctga
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTCATGACGCGGCCTTTACAAGGCTGAGGTCGGCGGTTCGAA
CCCGCCCGAGCCCAttt
Downstream region at tRNA end position 
ctgggacgaa
Secondary structure (Cloverleaf model)
>A171000446	Val	TAC
                   a      Attt ctgggacgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          C A
                    T     C C G C C     A
      C G A        G      | | | | |     G
    T       T C T G       G G C G G     C
    G         | | |                 T T
    G       T G A C
      T C A        G     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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