The detailed information of tRNA gene sequence


Sequence ID>A171000467
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 359378
End posion on genome 359304
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgaattac
tRNA gene sequence 
GGGCCTTTAGCTTAGTCCGGTTAAAGCGACTCGCTCATAACGAGTCGATCGCCGGTTCGA
ATCCGGCAAGGCCCAttt
Downstream region at tRNA end position 
cttactccaa
Secondary structure (Cloverleaf model)
>A171000467	Met	CAT
                   c      Attt cttactccaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C G G C C     A
    C T G A        A      | | | | |     G
  C         T T C G       G C C G G     C
  G         | | | |                 T T
  G         A A G C
    T T A          G     CGATC
                    A - T
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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