The detailed information of tRNA gene sequence


Sequence ID>A171000471
Genome IDCP001398
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
Start position on genome 299808
End posion on genome 299884
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cctttcgggc
tRNA gene sequence 
GGGCCCGTGGTCTAGACGGTTATGACGCCACCCTTACAAGGTGGAGGTCCGGGGTTCGAA
TCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
gttacaaact
Secondary structure (Cloverleaf model)
>A171000471	Val	TAC
                   c      ACCA gttacaaact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    C       T C T G       C G G G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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