The detailed information of tRNA gene sequence


Sequence ID>A171000513
Genome IDCP001398
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
Start position on genome 90386
End posion on genome 90310
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gctggacgtg
tRNA gene sequence 
GCCGGGGTGGTGTAGCCTGGTCAGCACAGGGGACTGTGGATCCCCTAGCCCGGGTTCAAA
TCCCGGCCCCGGCCCCA
Downstream region at tRNA end position 
taacagccct
Secondary structure (Cloverleaf model)
>A171000513	His	GTG
                   g      CCCA taacagccct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  T         T G T G       C C G G G     C
  G         + | | |                 T T
  G         G C A C
    T C A          A     TAGC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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