The detailed information of tRNA gene sequence


Sequence ID>A171000590
Genome IDCP001401
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus islandicus M.16.27 [CP001401]
Start position on genome 1392115
End posion on genome 1392040
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgtatatgT
tRNA gene sequence 
GGGCCCGTAGCTTAGCTCGGTAGAGCGCTCGGCTCATAACCGAGTGGTCAGGGGTTCAAA
TCCCCTCGGGCCCATga
Downstream region at tRNA end position 
aatttttact
Secondary structure (Cloverleaf model)
>A171000590	Met	CAT
                   T      ATga aatttttact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     A
    T       T T C G       A G G G G     C
    C       + | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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