The detailed information of tRNA gene sequence


Sequence ID>A171000800
Genome IDCP001688
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalomicrobium mukohataei DSM 12286 [CP001688]
Start position on genome 531121
End posion on genome 531046
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggacgtacga
tRNA gene sequence 
GGGCCCTTAGCTTAGTCTGGTTCAAAGCGATCGGCTCATAACCGATTGAGCGGTGGTTCA
AATCCGCCAGGGCCCAtcg
Downstream region at tRNA end position 
agttctttgt
Secondary structure (Cloverleaf model)
>A171000800	Met	CAT
                   a      Atcg agttctttgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C C G C C     A
    C T G A        A      | | + | |     A
  T         T T C G       G G T G G     C
  G         | | | |                 T T
  G         A A G C
    T T C A        G     TGAGC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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