The detailed information of tRNA gene sequence


Sequence ID>A171000812
Genome IDCP001690
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum borinquense DSM 11551 PR 3 [CP001690]
Start position on genome 1166808
End posion on genome 1166892
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacacccgct
tRNA gene sequence 
GGTGGGATGGCAGAGTGGACTATTGCGCCTGCCTTGAAAGCAGGTGGCCTTTGGCCTCCT
GGGTTCAAATCCCAGTCCCACCGCCt
Downstream region at tRNA end position 
tttcaagcga
Secondary structure (Cloverleaf model)
>A171000812	Ser	TGA
                   t      GCCt tttcaagcga
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G A C G       C T G G G     C
    G       + | | |                 T T
    A       T T G C
      C T A        G     TGGCCTTTGGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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