The detailed information of tRNA gene sequence


Sequence ID>A171000818
Genome IDCP001690
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum borinquense DSM 11551 PR 3 [CP001690]
Start position on genome 1446216
End posion on genome 1446290
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gaaatcgtac
tRNA gene sequence 
GGGCCGGTAGCTCAGTTAGGGAGAGCGTCTGACTCTTAATCAGACGGTCAAGGGTTCAAA
TCCCTTCCGGCCCGCtt
Downstream region at tRNA end position 
cctacggaat
Secondary structure (Cloverleaf model)
>A171000818	Lys	CTT
                   c      GCtt cctacggaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A A G G G     C
    A       | | | |                 T T
    G       G A G C
      G G A        G     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.-

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