The detailed information of tRNA gene sequence


Sequence ID>A171000873
Genome IDCP001696
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus fervens AG86 [CP001696]
Start position on genome 1013397
End posion on genome 1013324
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
taggagaagt
tRNA gene sequence 
GGGCCCGTAGCTCAGCTGGGAGAGCGCCGGCCTTGCAAGCCGGAGGCCGTGGGTTCAAAT
CCCACCGGGTCCACta
Downstream region at tRNA end position 
tatgtgcagc
Secondary structure (Cloverleaf model)
>A171000873	Ala	TGC
                   t      ACta tatgtgcagc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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