The detailed information of tRNA gene sequence


Sequence ID>A171000930
Genome IDCP001719
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter ruminantium M1 [CP001719]
Start position on genome 1160525
End posion on genome 1160610
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggttagataT
tRNA gene sequence 
GCCGAGATAGTCTAGCCTGGTAAGGCGCGGGACTGGAAATCCCGTGAGGGAAACCTCTCC
TGGGTTCAAATCCCAGTCTCGGCGTtt
Downstream region at tRNA end position 
attagtatat
Secondary structure (Cloverleaf model)
>A171000930	Ser	GGA
                   T      GTtt attagtatat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C T G G G     C
    T       | | + |                 T T
    G       A G G C
      G T A        G     TGAGGGAAACCTCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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