The detailed information of tRNA gene sequence


Sequence ID>A171000971
Genome IDCP001719
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter ruminantium M1 [CP001719]
Start position on genome 360811
End posion on genome 360740
Amino Acid Pseudo
Anticodon TCT
Upstream region at tRNA start position 
tggtccatct
tRNA gene sequence 
GCTTTAGTGTTGTAATTGGAAACAAACACCTCTTCTAAAGGTGAATTCTGGGTTCAAGTC
CCAGCTAGAGCTtta
Downstream region at tRNA end position 
aaaaaagaag
Secondary structure (Cloverleaf model)
>A171000971	Pseudo	TCT
                   t      Ttta aaaaaagaag
                     G - C
                     C - G
                     T - A
                     T + G
                     T - A
                     A - T
                     G - C          T G
                    T     G A C C C     A
      T A A        G      | | | | |     A
    T       T G T T       C T G G G     C
    G       | | | |                 T T
    G       A C A A
      A A          A     AATT
                    C - G
                    A - T
                    C - G
                    C - G
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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