The detailed information of tRNA gene sequence


Sequence ID>A171000974
Genome IDCP001719
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter ruminantium M1 [CP001719]
Start position on genome 360280
End posion on genome 360195
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaattaaat
tRNA gene sequence 
GCTATGGTGACTGAGTCAGGCTTAAGGTGTCCGCCTGGAGAGCGGATGTGCGAGAGCACC
AGAGGTTCAAATCCTCTTCATAGCGCtt
Downstream region at tRNA end position 
actatttttt
Secondary structure (Cloverleaf model)
>A171000974	Ser	GGA
                   t      GCtt actatttttt
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C
                     G + T          T A
                    T     T C T C C     A
    C T G A        G      | | | | |     A
  A         G T C A       A G A G G     C
  G           + | |                 T T
  G         A G G T
    C T T A        G     TGTGCGAGAGCACC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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