The detailed information of tRNA gene sequence


Sequence ID>A171001064
Genome IDCP001857
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus profundus DSM 5631 [CP001857]
Start position on genome 16547
End posion on genome 16622
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccaacttaaa
tRNA gene sequence 
GGACCCGTAGCCTAGCTTGGACAGGGCGTGGGCCTCCTAAGCCCAAGGTCGCGGGTTCAA
ATCCCGCCGGGTCCGCtt
Downstream region at tRNA end position 
ctattcgttt
Secondary structure (Cloverleaf model)
>A171001064	Arg	CCT
                   a      GCtt ctattcgttt
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
    T C G A        A      | | | | |     A
  T         T C C G       G C G G G     C
  G         + | | |                 T T
  G         G G G C
    A C A          G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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