The detailed information of tRNA gene sequence


Sequence ID>A171001091
Genome IDCP001857
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus profundus DSM 5631 [CP001857]
Start position on genome 1222611
End posion on genome 1222528
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagtgtgaT
tRNA gene sequence 
GCCGGGATTGCAGAGTGGTACTGCGCGGGCCTGGAGAGCCCGTGCCCTTCGGGGCTCCGG
GGTTCGAATCCCCGTCCCGGCGTtc
Downstream region at tRNA end position 
gtgatgattg
Secondary structure (Cloverleaf model)
>A171001091	Ser	GGA
                   T      GTtc gtgatgattg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
        G A        T      | | | | |     G
      T     G A C G       C G G G G     C
      G     | | | |                 T T
      G     C T G C
        T A        G     TGCCCTTCGGGGCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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