The detailed information of tRNA gene sequence


Sequence ID>A171001163
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 1103584
End posion on genome 1103656
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cagtgggtgc
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTAGATCACTCCCTTGGCATGGGAGAGGCCCCGGGTTCAAATC
CCGGCGAGTCCACtc
Downstream region at tRNA end position 
acttcctttc
Secondary structure (Cloverleaf model)
>A171001163	Ala	GGC
                   c      ACtc acttcctttc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      G     C T A G       C C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        A     AGGCC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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