The detailed information of tRNA gene sequence


Sequence ID>A171001171
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 2370349
End posion on genome 2370433
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gatagactga
tRNA gene sequence 
GCGGGGGTGGCTGAGCTAGGCCAAAAGCGGCGGACTTAAGATCCGCTCCCGTAGGGGTTC
GCGAGTTCAAATCTCGTCCCCCGCAttt
Downstream region at tRNA end position 
tcatctccga
Secondary structure (Cloverleaf model)
>A171001171	Leu	TAA
                   a      Attt tcatctccga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C T C     A
    T C G A        G      + | | | |     A
  A         G T C G       G C G A G     C
  G           | | |                 T T
  G         A A G C
    C C A A        G     TCCCGTAGGGGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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