The detailed information of tRNA gene sequence


Sequence ID>A171001193
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 1116892
End posion on genome 1116819
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cgtttctgta
tRNA gene sequence 
GGGCGTGTGGCCTAGTGGACAGGGCGAGAGGTTCCTAACCTCTCGATCGCGGGTTCGAAT
CCCGTCGCGCCCGCtt
Downstream region at tRNA end position 
cactcacttc
Secondary structure (Cloverleaf model)
>A171001193	Arg	CCT
                   a      GCtt cactcacttc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T + G
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T C C G       G C G G G     C
    G       + | | |                 T T
    A       G G G C
      C A          G     CGATC
                    A - T
                    G - C
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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