The detailed information of tRNA gene sequence


Sequence ID>A171001203
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 257899
End posion on genome 257826
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
atgcagcgtg
tRNA gene sequence 
TCCGGGTTGGGGTAGTGGACTATCCTTCAGCCTTGTGGAGGCTGAGACGCGGGTTCAATT
CTCGCACCTGGACCtc
Downstream region at tRNA end position 
ttcttcaaat
Secondary structure (Cloverleaf model)
>A171001203	His	GTG
                   g      CCtc ttcttcaaat
                     T - A
                     C - G
                     C - G
                     G + T
                     G - C
                     G - C
                     T - A          T T
                    T     C G C T C     A
      T G A        G      | | | + |     A
    G       T G G G       G C G G G     C
    G         | | +                 T T
    A       T C C T
      C T A        T     AGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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