The detailed information of tRNA gene sequence


Sequence ID>A171001213
Genome IDCP001899
Search identical group
Phylum/ClassEuryarchaeota
SpeciesFerroglobus placidus DSM 10642 [CP001899]
Start position on genome 1130228
End posion on genome 1130305
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttattgaatT
tRNA gene sequence 
GCCGAGGTGGCCTAGCTGGTCGGGGCGACGGACTCATAATCCGTAGGTCGCGGGTTCGAA
TCCCGCCCTCGGCATCC
Downstream region at tRNA end position 
tttcttttgg
Secondary structure (Cloverleaf model)
>A171001213	Met	CAT
                   T      ATCC tttcttttgg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    T       T C C G       G C G G G     C
    G       + | | |                 T T
    G       G G G C
      T C G        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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