The detailed information of tRNA gene sequence


Sequence ID>A171001259
Genome IDCP001901
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus sp. FS406-22 [CP001901]
Start position on genome 1157299
End posion on genome 1157376
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttcctttagt
tRNA gene sequence 
GGGCCTGTGGGGTAGCCTGGTCTATCCTTTGGGATTTGGGATCCTGAGACCCCAGTTCAA
ATCTGGGCAGGCCCACCA
Downstream region at tRNA end position 
cttcgtgtcc
Secondary structure (Cloverleaf model)
>A171001259	Pro	TGG
                   t      ACCA cttcgtgtcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G G T C     A
    C C G A        G      | | | | |     A
  T         T G G G       C C C A G     C
  G           | | +                 T T
  G         T C C T
    T C T A        T     AGAC
                    T + G
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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