The detailed information of tRNA gene sequence


Sequence ID>A171001269
Genome IDCP001901
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus sp. FS406-22 [CP001901]
Start position on genome 1621836
End posion on genome 1621760
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gattgagaga
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGTCCATCCCGCCGGGCTCATAACCCGGAGATCGGAGGTTCA
AATCCTCCCCCCGCTACta
Downstream region at tRNA end position 
tttgtatatt
Secondary structure (Cloverleaf model)
>A171001269	Met	CAT
                   a      ACta tttgtatatt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G G A G G     C
  G           | | |                 T T
  G         T C C C
    T C C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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