The detailed information of tRNA gene sequence


Sequence ID>A171001277
Genome IDCP001901
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus sp. FS406-22 [CP001901]
Start position on genome 1199045
End posion on genome 1198972
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
gaatgagaga
tRNA gene sequence 
GCCCCGGTGGTGTAGCCAGGATAGCATAGAGGGCTGCGGACCCTCAGACAGGGGTTCAAA
TCCCCTCCGGGGCAtta
Downstream region at tRNA end position 
tttttattta
Secondary structure (Cloverleaf model)
>A171001277	Arg	GCG
                   a      Atta tttttattta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C C C C     A
    C C G A        G      | | | | |     A
  A         T G T G       A G G G G     C
  G         + | | +                 T T
  G         G C A T
    A T A          A     AGAC
                    G - C
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.-

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